I finally got around to emailing Yakima and Thule this morning. I'll post an update when I hear back from them. I sent the following message and pictures
"Good Morning,
I have recently purchased the newly released Ford Focus RS and would like to purchase a new roof rack. However, I have some concerns about the fit for this specific vehicle.
This specific trim level (RS) of the Focus is solely built in Germany and therefore even the ones that are sold in North America have the European body. For the most part the NA and EU bodies are identical except for roof rack alignment holes in the door jams. I've attached a few pictures that will help explain this.
It seems to me that the RS trim will require the European Ford Focus fit kit in North America. If this is in fact the case, it seems that the EU Whispbar kit should fit as well since I see that there is no Focus Whispbar kit available in the US.
I would prefer to not have to jump through hoops and order from a European retailer; please advise on how I should proceed. Your urgent attention to the matter would be greatly appreciated. Please feel free to reach out if you have any questions.
Regards,
Chris"